No. words: 1300; after pruning: 1274


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.6 (1,1:492)  474  0.00 0.00 0.40  BE442818Ld12P129A03P129A091F1_017.ab1        1   494 (139)  C BE442818Ld12P129A03P129A091R1_017.ab1   (175)   492     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE442818Ld12P129A03P129A091R1_017.ab1   667 
  235    BE442818Ld12P129A03P129A091F1_017.ab1    60 
  239  C BE442818Ld12P129A03P129A091R1_017.ab1   429 
  319    BE442818Ld12P129A03P129A091F1_017.ab1   144 
  327  C BE442818Ld12P129A03P129A091R1_017.ab1   341 
  343    BE442818Ld12P129A03P129A091F1_017.ab1   168 
  363  C BE442818Ld12P129A03P129A091R1_017.ab1   305 
  375    BE442818Ld12P129A03P129A091F1_017.ab1   200 
  403  C BE442818Ld12P129A03P129A091R1_017.ab1   265 
  415    BE442818Ld12P129A03P129A091F1_017.ab1   240 
  423  C BE442818Ld12P129A03P129A091R1_017.ab1   245 
  427    BE442818Ld12P129A03P129A091F1_017.ab1   252 
  443  C BE442818Ld12P129A03P129A091R1_017.ab1   225 
  527    BE442818Ld12P129A03P129A091F1_017.ab1   352 
  539  C BE442818Ld12P129A03P129A091R1_017.ab1   129 
  547    BE442818Ld12P129A03P129A091F1_017.ab1   372 
Contig length: old 807, new 808

Contig length: old 808, new 808
New start: 0