No. words: 1095; after pruning: 1069


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:422)  402  0.00 0.47 0.24  BE442875Ld01P003B06B12F1_033.ab1        1   423 (140)  C BE442875Ld01P003B06B12R1_033.ab1   (108)   424     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1  C BE442875Ld01P003B06B12R1_033.ab1   532 
  162    BE442875Ld01P003B06B12F1_033.ab1    52 
  166  C BE442875Ld01P003B06B12R1_033.ab1   367 
  174    BE442875Ld01P003B06B12F1_033.ab1    64 
  178  C BE442875Ld01P003B06B12R1_033.ab1   355 
  194    BE442875Ld01P003B06B12F1_033.ab1    84 
  198  C BE442875Ld01P003B06B12R1_033.ab1   335 
  230    BE442875Ld01P003B06B12F1_033.ab1   120 
  238  C BE442875Ld01P003B06B12R1_033.ab1   295 
  242    BE442875Ld01P003B06B12F1_033.ab1   132 
  254  C BE442875Ld01P003B06B12R1_033.ab1   279 
  258    BE442875Ld01P003B06B12F1_033.ab1   148 
  270  C BE442875Ld01P003B06B12R1_033.ab1   263 
  274    BE442875Ld01P003B06B12F1_033.ab1   164 
  290  C BE442875Ld01P003B06B12R1_033.ab1   243 
  306    BE442875Ld01P003B06B12F1_033.ab1   196 
  322  C BE442875Ld01P003B06B12R1_033.ab1   211 
  334    BE442875Ld01P003B06B12F1_033.ab1   224 
  350  C BE442875Ld01P003B06B12R1_033.ab1   183 
  362    BE442875Ld01P003B06B12F1_033.ab1   252 
  370  C BE442875Ld01P003B06B12R1_033.ab1   163 
  386    BE442875Ld01P003B06B12F1_033.ab1   276 
  390  C BE442875Ld01P003B06B12R1_033.ab1   143 
  398    BE442875Ld01P003B06B12F1_033.ab1   288 
  438  C BE442875Ld01P003B06B12R1_033.ab1    95 
  446    BE442875Ld01P003B06B12F1_033.ab1   336 
Contig length: old 672, new 673

Contig length: old 673, new 673
New start: 0