No. words: 1089; after pruning: 1063


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:412)  405  0.00 0.00 0.00  BE442875Ld03P003B06B12F1_049.ab1        1   413 (154)  C BE442875Ld03P003B06B12R1_049.ab1   (109)   413     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE442875Ld03P003B06B12R1_049.ab1   522 
  117    BE442875Ld03P003B06B12F1_049.ab1     8 
  121  C BE442875Ld03P003B06B12R1_049.ab1   402 
  137    BE442875Ld03P003B06B12F1_049.ab1    28 
  145  C BE442875Ld03P003B06B12R1_049.ab1   378 
  149    BE442875Ld03P003B06B12F1_049.ab1    40 
  153  C BE442875Ld03P003B06B12R1_049.ab1   370 
  157    BE442875Ld03P003B06B12F1_049.ab1    48 
Contig length: old 676, new 676

Contig length: old 676, new 676
New start: 0