No. words: 1050; after pruning: 1024


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:477)  452  0.21 0.21 0.21  BE443288Sn28P052H02P003D081F1_026.ab1        1   478 (59)  C BE443288Sn28P052H02P003D081R1_026.ab1   (35)   478     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE443288Sn28P052H02P003D081R1_026.ab1   513 
   63    BE443288Sn28P052H02P003D081F1_026.ab1    27 
   71  C BE443288Sn28P052H02P003D081R1_026.ab1   443 
   79    BE443288Sn28P052H02P003D081F1_026.ab1    43 
   83  C BE443288Sn28P052H02P003D081R1_026.ab1   431 
  148    BE443288Sn28P052H02P003D081F1_026.ab1   112 
  160  C BE443288Sn28P052H02P003D081R1_026.ab1   354 
  168    BE443288Sn28P052H02P003D081F1_026.ab1   132 
  172  C BE443288Sn28P052H02P003D081R1_026.ab1   342 
  192    BE443288Sn28P052H02P003D081F1_026.ab1   156 
  200  C BE443288Sn28P052H02P003D081R1_026.ab1   314 
  296    BE443288Sn28P052H02P003D081F1_026.ab1   260 
  352  C BE443288Sn28P052H02P003D081R1_026.ab1   162 
  368    BE443288Sn28P052H02P003D081F1_026.ab1   332 
  384  C BE443288Sn28P052H02P003D081R1_026.ab1   130 
  400    BE443288Sn28P052H02P003D081F1_026.ab1   364 
  428  C BE443288Sn28P052H02P003D081R1_026.ab1    86 
  436    BE443288Sn28P052H02P003D081F1_026.ab1   400 
  448  C BE443288Sn28P052H02P003D081R1_026.ab1    66 
  468    BE443288Sn28P052H02P003D081F1_026.ab1   432 
  476  C BE443288Sn28P052H02P003D081R1_026.ab1    38 
  480    BE443288Sn28P052H02P003D081F1_026.ab1   444 
Contig length: old 572, new 573

Contig length: old 573, new 573
New start: 0