No. words: 1408; after pruning: 1382


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
 0  60  732 734    586     S 60- 645
Fail: (1)  586    0.0 1.6 (1,1:-60)   80  2.30 0.00 0.00  BE444579Ld08P129C03P129C091F1_087.ab1      587   673 (2)    BE444579Ld08P129C03P129C091R1_087.ab1      647   733 (0)  

Pass: 4
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       0        1

Gap   # merges  # failures
 size
586       0        1

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 

Merge:(0)  586    0.0 1.6 (1,1:-60)   80  2.30 0.00 0.00  BE444579Ld08P129C03P129C091F1_087.ab1      587   673 (2)    BE444579Ld08P129C03P129C091R1_087.ab1      647   733 (0)  

Contig 1:  42 nodes

 23 str. conn. components

Path
    1    BE444579Ld08P129C03P129C091F1_087.ab1     1 
  590    BE444579Ld08P129C03P129C091R1_087.ab1   650 
  634    BE444579Ld08P129C03P129C091F1_087.ab1   634 
  646    BE444579Ld08P129C03P129C091R1_087.ab1   706 
  670    BE444579Ld08P129C03P129C091F1_087.ab1   670 
Contig length: old 735, new 675

Contig length: old 675, new 675
New start: 0