No. words: 1607; after pruning: 1581


Histogram of relative pair offsets, for read pairs with multiple alignments:
75     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:841)  738  0.52 0.00 0.00  BE444579Ld12P129C03P129C091F1_094.ab1       24   788 (0)  C BE444579Ld12P129C03P129C091R1_094.ab1   (0)   819    55 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    BE444579Ld12P129C03P129C091F1_094.ab1     1 
   27  C BE444579Ld12P129C03P129C091R1_094.ab1   816 
   44    BE444579Ld12P129C03P129C091F1_094.ab1    44 
  259  C BE444579Ld12P129C03P129C091R1_094.ab1   584 
  283    BE444579Ld12P129C03P129C091F1_094.ab1   283 
  331  C BE444579Ld12P129C03P129C091R1_094.ab1   512 
  347    BE444579Ld12P129C03P129C091F1_094.ab1   347 
  419  C BE444579Ld12P129C03P129C091R1_094.ab1   424 
  423    BE444579Ld12P129C03P129C091F1_094.ab1   423 
  467  C BE444579Ld12P129C03P129C091R1_094.ab1   376 
  475    BE444579Ld12P129C03P129C091F1_094.ab1   475 
  495  C BE444579Ld12P129C03P129C091R1_094.ab1   348 
  739    BE444579Ld12P129C03P129C091F1_094.ab1   739 
  743  C BE444579Ld12P129C03P129C091R1_094.ab1   100 
Contig length: old 842, new 842

Contig length: old 842, new 842
New start: 0 
S Change at: 83; seg lengths: entry 1, contig 1