No. words: 1303; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:620)  590  0.16 0.16 0.00  BE444579Ta20P146A06P129C091F1_087.ab1        1   621 (8)  C BE444579Ta20P146A06P129C091R1_087.ab1   (52)   622     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE444579Ta20P146A06P129C091R1_087.ab1   674 
   88    BE444579Ta20P146A06P129C091F1_087.ab1    35 
  100  C BE444579Ta20P146A06P129C091R1_087.ab1   575 
  120    BE444579Ta20P146A06P129C091F1_087.ab1    67 
  128  C BE444579Ta20P146A06P129C091R1_087.ab1   547 
  152    BE444579Ta20P146A06P129C091F1_087.ab1    99 
  180  C BE444579Ta20P146A06P129C091R1_087.ab1   495 
  204    BE444579Ta20P146A06P129C091F1_087.ab1   151 
  220  C BE444579Ta20P146A06P129C091R1_087.ab1   455 
  296    BE444579Ta20P146A06P129C091F1_087.ab1   243 
  300  C BE444579Ta20P146A06P129C091R1_087.ab1   375 
  388    BE444579Ta20P146A06P129C091F1_087.ab1   335 
  484  C BE444579Ta20P146A06P129C091R1_087.ab1   191 
  516    BE444579Ta20P146A06P129C091F1_087.ab1   463 
  520  C BE444579Ta20P146A06P129C091R1_087.ab1   155 
  528    BE444579Ta20P146A06P129C091F1_087.ab1   475 
  536  C BE444579Ta20P146A06P129C091R1_087.ab1   139 
  544    BE444579Ta20P146A06P129C091F1_087.ab1   491 
  548  C BE444579Ta20P146A06P129C091R1_087.ab1   127 
  556    BE444579Ta20P146A06P129C091F1_087.ab1   503 
  604  C BE444579Ta20P146A06P129C091R1_087.ab1    71 
  632    BE444579Ta20P146A06P129C091F1_087.ab1   579 
  636  C BE444579Ta20P146A06P129C091R1_087.ab1    39 
  656    BE444579Ta20P146A06P129C091F1_087.ab1   603 
  664  C BE444579Ta20P146A06P129C091R1_087.ab1    11 
  668    BE444579Ta20P146A06P129C091F1_087.ab1   615 
Contig length: old 682, new 682

Contig length: old 682, new 682
New start: 0