No. words: 1504; after pruning: 1478


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:887)  593  0.00 0.00 0.00  BE444864Ld01P003E02E08F1_020.ab1      202   817 (0)  C BE444864Ld01P003E02E08R1_020.ab1   (0)   687    72 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    BE444864Ld01P003E02E08F1_020.ab1     1 
  509  C BE444864Ld01P003E02E08R1_020.ab1   380 
  517    BE444864Ld01P003E02E08F1_020.ab1   517 
  525  C BE444864Ld01P003E02E08R1_020.ab1   364 
  533    BE444864Ld01P003E02E08F1_020.ab1   533 
  537  C BE444864Ld01P003E02E08R1_020.ab1   352 
  541    BE444864Ld01P003E02E08F1_020.ab1   541 
  569  C BE444864Ld01P003E02E08R1_020.ab1   320 
  573    BE444864Ld01P003E02E08F1_020.ab1   573 
  577  C BE444864Ld01P003E02E08R1_020.ab1   312 
  589    BE444864Ld01P003E02E08F1_020.ab1   589 
  593  C BE444864Ld01P003E02E08R1_020.ab1   296 
  653    BE444864Ld01P003E02E08F1_020.ab1   653 
  657  C BE444864Ld01P003E02E08R1_020.ab1   232 
Contig length: old 888, new 888

Contig length: old 888, new 888
New start: 0