No. words: 1203; after pruning: 1177


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.6 (1,1:563)  539  0.00 0.00 0.00  BE444864Ta12P026H05P003E081F1_074.ab1        5   564 (41)  C BE444864Ta12P026H05P003E081R1_074.ab1   (38)   560     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE444864Ta12P026H05P003E081R1_074.ab1   598 
   94    BE444864Ta12P026H05P003E081F1_074.ab1    60 
   98  C BE444864Ta12P026H05P003E081R1_074.ab1   501 
  106    BE444864Ta12P026H05P003E081F1_074.ab1    72 
  114  C BE444864Ta12P026H05P003E081R1_074.ab1   485 
  126    BE444864Ta12P026H05P003E081F1_074.ab1    92 
  130  C BE444864Ta12P026H05P003E081R1_074.ab1   469 
  134    BE444864Ta12P026H05P003E081F1_074.ab1   100 
  138  C BE444864Ta12P026H05P003E081R1_074.ab1   461 
  142    BE444864Ta12P026H05P003E081F1_074.ab1   108 
  154  C BE444864Ta12P026H05P003E081R1_074.ab1   445 
  170    BE444864Ta12P026H05P003E081F1_074.ab1   136 
  178  C BE444864Ta12P026H05P003E081R1_074.ab1   421 
  394    BE444864Ta12P026H05P003E081F1_074.ab1   360 
  398  C BE444864Ta12P026H05P003E081R1_074.ab1   201 
  410    BE444864Ta12P026H05P003E081F1_074.ab1   376 
  422  C BE444864Ta12P026H05P003E081R1_074.ab1   177 
  490    BE444864Ta12P026H05P003E081F1_074.ab1   456 
  526  C BE444864Ta12P026H05P003E081R1_074.ab1    73 
  534    BE444864Ta12P026H05P003E081F1_074.ab1   500 
  542  C BE444864Ta12P026H05P003E081R1_074.ab1    57 
  550    BE444864Ta12P026H05P003E081F1_074.ab1   516 
Contig length: old 639, new 639

Contig length: old 639, new 639
New start: 0