No. words: 1192; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:552)  532  0.00 0.00 0.00  BE444864Td08P026H05P003E081F1_065.ab1        1   553 (42)  C BE444864Td08P026H05P003E081R1_065.ab1   (44)   553     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  278 nodes

 141 str. conn. components

Path
    1  C BE444864Td08P026H05P003E081R1_065.ab1   597 
  120    BE444864Td08P026H05P003E081F1_065.ab1    76 
  136  C BE444864Td08P026H05P003E081R1_065.ab1   462 
  412    BE444864Td08P026H05P003E081F1_065.ab1   368 
  420  C BE444864Td08P026H05P003E081R1_065.ab1   178 
  488    BE444864Td08P026H05P003E081F1_065.ab1   444 
  516  C BE444864Td08P026H05P003E081R1_065.ab1    82 
  552    BE444864Td08P026H05P003E081F1_065.ab1   508 
  556  C BE444864Td08P026H05P003E081R1_065.ab1    42 
  560    BE444864Td08P026H05P003E081F1_065.ab1   516 
Contig length: old 639, new 639

Contig length: old 639, new 639
New start: 0