No. words: 1757; after pruning: 1717


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.0 (1,1:943)  782  0.12 0.00 0.00  BE444864Tu01P003E02E08F1_091.ab1       73   885 (0)  C BE444864Tu01P003E02E08R1_091.ab1   (0)   872    60 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1    BE444864Tu01P003E02E08F1_091.ab1     1 
  372  C BE444864Tu01P003E02E08R1_091.ab1   573 
  376    BE444864Tu01P003E02E08F1_091.ab1   376 
  444  C BE444864Tu01P003E02E08R1_091.ab1   501 
  452    BE444864Tu01P003E02E08F1_091.ab1   452 
  460  C BE444864Tu01P003E02E08R1_091.ab1   485 
  464    BE444864Tu01P003E02E08F1_091.ab1   464 
  484  C BE444864Tu01P003E02E08R1_091.ab1   461 
  492    BE444864Tu01P003E02E08F1_091.ab1   492 
  496  C BE444864Tu01P003E02E08R1_091.ab1   449 
  508    BE444864Tu01P003E02E08F1_091.ab1   508 
  512  C BE444864Tu01P003E02E08R1_091.ab1   433 
  520    BE444864Tu01P003E02E08F1_091.ab1   520 
  524  C BE444864Tu01P003E02E08R1_091.ab1   421 
Contig length: old 944, new 944

Contig length: old 944, new 944
New start: 0