No. words: 1297; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:
 1     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:1003)  280  1.37 0.00 0.00  BE444961Tu01P016D03P016D091F1_039.ab1      270   562 (0)  C BE444961Tu01P016D03P016D091R1_039.ab1   (0)   735   443 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1    BE444961Tu01P016D03P016D091F1_039.ab1     1 
  397  C BE444961Tu01P016D03P016D091R1_039.ab1   608 
  401    BE444961Tu01P016D03P016D091F1_039.ab1   401 
  405  C BE444961Tu01P016D03P016D091R1_039.ab1   600 
  421    BE444961Tu01P016D03P016D091F1_039.ab1   421 
  429  C BE444961Tu01P016D03P016D091R1_039.ab1   576 
Contig length: old 1004, new 1004

Contig length: old 1004, new 1004
New start: 0