No. words: 1342; after pruning: 1288


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.0 (1,1:799)  529  0.55 0.00 0.00  BE445287Ta16P068D09P019B111F1_002.ab1      129   670 (0)  C BE445287Ta16P068D09P019B111R1_002.ab1   (0)   672   131 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1    BE445287Ta16P068D09P019B111F1_002.ab1     1 
  428  C BE445287Ta16P068D09P019B111R1_002.ab1   373 
  432    BE445287Ta16P068D09P019B111F1_002.ab1   432 
  436  C BE445287Ta16P068D09P019B111R1_002.ab1   365 
  440    BE445287Ta16P068D09P019B111F1_002.ab1   440 
  448  C BE445287Ta16P068D09P019B111R1_002.ab1   353 
Contig length: old 800, new 800

Contig length: old 800, new 800
New start: 0