No. words: 1325; after pruning: 1299


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.1 (1,1:798)  480  0.00 1.72 0.00  BE445287Ta20P068D09P019B111F1_025.ab1      186   709 (0)  C BE445287Ta20P068D09P019B111R1_025.ab1   (0)   616    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1    BE445287Ta20P068D09P019B111F1_025.ab1     1 
  445  C BE445287Ta20P068D09P019B111R1_025.ab1   356 
  477    BE445287Ta20P068D09P019B111F1_025.ab1   477 
  493  C BE445287Ta20P068D09P019B111R1_025.ab1   308 
  513    BE445287Ta20P068D09P019B111F1_025.ab1   513 
  517  C BE445287Ta20P068D09P019B111R1_025.ab1   284 
  545    BE445287Ta20P068D09P019B111F1_025.ab1   545 
  549  C BE445287Ta20P068D09P019B111R1_025.ab1   252 
Contig length: old 799, new 800

Contig length: old 800, new 800
New start: 0