No. words: 1548; after pruning: 1522


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.0 (1,1:809)  626  0.27 2.17 0.81  BE445287Td05P068D09P019B111F1_007.ab1       61   797 (1)  C BE445287Td05P068D09P019B111R1_007.ab1   (3)   747     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    BE445287Td05P068D09P019B111F1_007.ab1     1 
  296  C BE445287Td05P068D09P019B111R1_007.ab1   517 
  320    BE445287Td05P068D09P019B111F1_007.ab1   320 
  456  C BE445287Td05P068D09P019B111R1_007.ab1   357 
  464    BE445287Td05P068D09P019B111F1_007.ab1   464 
  476  C BE445287Td05P068D09P019B111R1_007.ab1   337 
  804    BE445287Td05P068D09P019B111F1_007.ab1   789 
Contig length: old 810, new 813

Contig length: old 813, new 813
New start: 0