No. words: 1363; after pruning: 1323


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.3 (1,1:798)  522  0.54 0.71 0.18  BE445287Td06P068D09P019B111F1_005.ab1      155   714 (3)  C BE445287Td06P068D09P019B111R1_005.ab1   (0)   646    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1    BE445287Td06P068D09P019B111F1_005.ab1     1 
  370  C BE445287Td06P068D09P019B111R1_005.ab1   431 
  378    BE445287Td06P068D09P019B111F1_005.ab1   378 
  426  C BE445287Td06P068D09P019B111R1_005.ab1   375 
  430    BE445287Td06P068D09P019B111F1_005.ab1   430 
  434  C BE445287Td06P068D09P019B111R1_005.ab1   367 
  462    BE445287Td06P068D09P019B111F1_005.ab1   462 
  466  C BE445287Td06P068D09P019B111R1_005.ab1   335 
Contig length: old 799, new 800

Contig length: old 800, new 800
New start: 0