No. words: 1366; after pruning: 1340


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:636)  614  0.00 0.31 0.00  BE445328As01P129E03P129E091F1_052.ab1        1   636 (55)  C BE445328As01P129E03P129E091R1_052.ab1   (37)   638     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE445328As01P129E03P129E091R1_052.ab1   675 
  554    BE445328As01P129E03P129E091F1_052.ab1   516 
  582  C BE445328As01P129E03P129E091R1_052.ab1    94 
  586    BE445328As01P129E03P129E091F1_052.ab1   548 
Contig length: old 729, new 729

Contig length: old 729, new 729
New start: 0