No. words: 1369; after pruning: 1343


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:515)  509  0.19 0.00 0.00  BE445328Ld10P129H03P129H091F1_045.ab1        1   516 (152)  C BE445328Ld10P129H03P129H091R1_045.ab1   (185)   516     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1  C BE445328Ld10P129H03P129H091R1_045.ab1   701 
  293    BE445328Ld10P129H03P129H091F1_045.ab1   108 
  301  C BE445328Ld10P129H03P129H091R1_045.ab1   401 
  305    BE445328Ld10P129H03P129H091F1_045.ab1   120 
  369  C BE445328Ld10P129H03P129H091R1_045.ab1   333 
  437    BE445328Ld10P129H03P129H091F1_045.ab1   252 
  509  C BE445328Ld10P129H03P129H091R1_045.ab1   193 
  545    BE445328Ld10P129H03P129H091F1_045.ab1   360 
  561  C BE445328Ld10P129H03P129H091R1_045.ab1   141 
  589    BE445328Ld10P129H03P129H091F1_045.ab1   404 
  621  C BE445328Ld10P129H03P129H091R1_045.ab1    81 
  625    BE445328Ld10P129H03P129H091F1_045.ab1   440 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0