No. words: 1023; after pruning: 997


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:532)  444  0.64 0.00 0.00  BE445348At01P078A02P078A081F1_086.ab1        1   471 (0)  C BE445348At01P078A02P078A081R1_086.ab1   (19)   533    63 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BE445348At01P078A02P078A081R1_086.ab1   552 
   23    BE445348At01P078A02P078A081F1_086.ab1     4 
   51  C BE445348At01P078A02P078A081R1_086.ab1   502 
   59    BE445348At01P078A02P078A081F1_086.ab1    40 
  159  C BE445348At01P078A02P078A081R1_086.ab1   394 
  163    BE445348At01P078A02P078A081F1_086.ab1   144 
  187  C BE445348At01P078A02P078A081R1_086.ab1   366 
  195    BE445348At01P078A02P078A081F1_086.ab1   176 
  203  C BE445348At01P078A02P078A081R1_086.ab1   350 
  207    BE445348At01P078A02P078A081F1_086.ab1   188 
  215  C BE445348At01P078A02P078A081R1_086.ab1   338 
  219    BE445348At01P078A02P078A081F1_086.ab1   200 
  247  C BE445348At01P078A02P078A081R1_086.ab1   306 
  251    BE445348At01P078A02P078A081F1_086.ab1   232 
  259  C BE445348At01P078A02P078A081R1_086.ab1   294 
  263    BE445348At01P078A02P078A081F1_086.ab1   244 
  291  C BE445348At01P078A02P078A081R1_086.ab1   262 
  295    BE445348At01P078A02P078A081F1_086.ab1   276 
  315  C BE445348At01P078A02P078A081R1_086.ab1   238 
  327    BE445348At01P078A02P078A081F1_086.ab1   308 
  343  C BE445348At01P078A02P078A081R1_086.ab1   210 
  347    BE445348At01P078A02P078A081F1_086.ab1   328 
  427  C BE445348At01P078A02P078A081R1_086.ab1   126 
  431    BE445348At01P078A02P078A081F1_086.ab1   412 
  439  C BE445348At01P078A02P078A081R1_086.ab1   114 
  443    BE445348At01P078A02P078A081F1_086.ab1   424 
  461  C BE445348At01P078A02P078A081R1_086.ab1    92 
  473    BE445348At01P078A02P078A081F1_086.ab1   454 
  485  C BE445348At01P078A02P078A081R1_086.ab1    68 
Contig length: old 552, new 552

Contig length: old 552, new 552
New start: 0