No. words: 1364; after pruning: 1338


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.8 (1,1:520)  500  0.19 0.00 0.00  BE445348Ld02P078A02P078A081F1_006.ab1        5   521 (178)  C BE445348Ld02P078A02P078A081R1_006.ab1   (148)   517     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C BE445348Ld02P078A02P078A081R1_006.ab1   665 
  264    BE445348Ld02P078A02P078A081F1_006.ab1   120 
  268  C BE445348Ld02P078A02P078A081R1_006.ab1   398 
  352    BE445348Ld02P078A02P078A081F1_006.ab1   208 
  436  C BE445348Ld02P078A02P078A081R1_006.ab1   230 
  572    BE445348Ld02P078A02P078A081F1_006.ab1   428 
  636  C BE445348Ld02P078A02P078A081R1_006.ab1    30 
  640    BE445348Ld02P078A02P078A081F1_006.ab1   496 
Contig length: old 843, new 843

Contig length: old 843, new 843
New start: 0