No. words: 1413; after pruning: 1387


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:835)  539  0.52 0.35 0.00  BE446087Sn28P052H03P016F091F1_058.ab1        7   581 (0)  C BE446087Sn28P052H03P016F091R1_058.ab1   (0)   832   256 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1    BE446087Sn28P052H03P016F091F1_058.ab1     1 
  401  C BE446087Sn28P052H03P016F091R1_058.ab1   436 
  405    BE446087Sn28P052H03P016F091F1_058.ab1   405 
  409  C BE446087Sn28P052H03P016F091R1_058.ab1   428 
Contig length: old 836, new 836

Contig length: old 836, new 836
New start: 0