No. words: 1373; after pruning: 1347


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:715)  570  0.17 0.17 0.00  BE446087Sn29P038A09P016F091F1_071.ab1        1   595 (0)  C BE446087Sn29P038A09P016F091R1_071.ab1   (61)   717   122 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE446087Sn29P038A09P016F091R1_071.ab1   778 
   65    BE446087Sn29P038A09P016F091F1_071.ab1     4 
   73  C BE446087Sn29P038A09P016F091R1_071.ab1   706 
   86    BE446087Sn29P038A09P016F091F1_071.ab1    24 
   90  C BE446087Sn29P038A09P016F091R1_071.ab1   689 
   94    BE446087Sn29P038A09P016F091F1_071.ab1    32 
  110  C BE446087Sn29P038A09P016F091R1_071.ab1   669 
  114    BE446087Sn29P038A09P016F091F1_071.ab1    52 
  118  C BE446087Sn29P038A09P016F091R1_071.ab1   661 
  138    BE446087Sn29P038A09P016F091F1_071.ab1    76 
  142  C BE446087Sn29P038A09P016F091R1_071.ab1   637 
  192    BE446087Sn29P038A09P016F091F1_071.ab1   130 
  196  C BE446087Sn29P038A09P016F091R1_071.ab1   583 
  216    BE446087Sn29P038A09P016F091F1_071.ab1   154 
  220  C BE446087Sn29P038A09P016F091R1_071.ab1   559 
Contig length: old 778, new 778

Contig length: old 778, new 778
New start: 0