No. words: 1323; after pruning: 1297


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 10.4 (1,1:596)  569  0.00 0.34 0.00  BE446087Ta14P052G03P016F091F1_038.ab1        7   596 (86)  C BE446087Ta14P052G03P016F091R1_038.ab1   (49)   592     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE446087Ta14P052G03P016F091R1_038.ab1   641 
   90    BE446087Ta14P052G03P016F091F1_038.ab1    45 
   98  C BE446087Ta14P052G03P016F091R1_038.ab1   544 
  102    BE446087Ta14P052G03P016F091F1_038.ab1    57 
  118  C BE446087Ta14P052G03P016F091R1_038.ab1   524 
  122    BE446087Ta14P052G03P016F091F1_038.ab1    77 
  138  C BE446087Ta14P052G03P016F091R1_038.ab1   504 
  142    BE446087Ta14P052G03P016F091F1_038.ab1    97 
  158  C BE446087Ta14P052G03P016F091R1_038.ab1   484 
  162    BE446087Ta14P052G03P016F091F1_038.ab1   117 
  178  C BE446087Ta14P052G03P016F091R1_038.ab1   464 
  182    BE446087Ta14P052G03P016F091F1_038.ab1   137 
  186  C BE446087Ta14P052G03P016F091R1_038.ab1   456 
  202    BE446087Ta14P052G03P016F091F1_038.ab1   157 
  354  C BE446087Ta14P052G03P016F091R1_038.ab1   288 
  366    BE446087Ta14P052G03P016F091F1_038.ab1   321 
  374  C BE446087Ta14P052G03P016F091R1_038.ab1   268 
  378    BE446087Ta14P052G03P016F091F1_038.ab1   333 
  398  C BE446087Ta14P052G03P016F091R1_038.ab1   244 
  402    BE446087Ta14P052G03P016F091F1_038.ab1   357 
  410  C BE446087Ta14P052G03P016F091R1_038.ab1   232 
  418    BE446087Ta14P052G03P016F091F1_038.ab1   373 
  430  C BE446087Ta14P052G03P016F091R1_038.ab1   212 
  542    BE446087Ta14P052G03P016F091F1_038.ab1   497 
  546  C BE446087Ta14P052G03P016F091R1_038.ab1    96 
  634    BE446087Ta14P052G03P016F091F1_038.ab1   589 
Contig length: old 726, new 727

Contig length: old 727, new 727
New start: 0