No. words: 1364; after pruning: 1338


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:632)  612  0.00 0.32 0.00  BE446087Td04P052G03P016F091F1_041.ab1        1   632 (48)  C BE446087Td04P052G03P016F091R1_041.ab1   (50)   634     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C BE446087Td04P052G03P016F091R1_041.ab1   684 
   94    BE446087Td04P052G03P016F091F1_041.ab1    42 
   98  C BE446087Td04P052G03P016F091R1_041.ab1   587 
  102    BE446087Td04P052G03P016F091F1_041.ab1    50 
  118  C BE446087Td04P052G03P016F091R1_041.ab1   567 
  122    BE446087Td04P052G03P016F091F1_041.ab1    70 
  158  C BE446087Td04P052G03P016F091R1_041.ab1   527 
  162    BE446087Td04P052G03P016F091F1_041.ab1   110 
  174  C BE446087Td04P052G03P016F091R1_041.ab1   511 
  178    BE446087Td04P052G03P016F091F1_041.ab1   126 
  190  C BE446087Td04P052G03P016F091R1_041.ab1   495 
  206    BE446087Td04P052G03P016F091F1_041.ab1   154 
  310  C BE446087Td04P052G03P016F091R1_041.ab1   375 
  318    BE446087Td04P052G03P016F091F1_041.ab1   266 
  362  C BE446087Td04P052G03P016F091R1_041.ab1   323 
  366    BE446087Td04P052G03P016F091F1_041.ab1   314 
  410  C BE446087Td04P052G03P016F091R1_041.ab1   275 
  414    BE446087Td04P052G03P016F091F1_041.ab1   362 
  430  C BE446087Td04P052G03P016F091R1_041.ab1   255 
  526    BE446087Td04P052G03P016F091F1_041.ab1   474 
  538  C BE446087Td04P052G03P016F091R1_041.ab1   147 
  542    BE446087Td04P052G03P016F091F1_041.ab1   490 
  554  C BE446087Td04P052G03P016F091R1_041.ab1   131 
  586    BE446087Td04P052G03P016F091F1_041.ab1   534 
  606  C BE446087Td04P052G03P016F091R1_041.ab1    79 
  622    BE446087Td04P052G03P016F091F1_041.ab1   570 
  630  C BE446087Td04P052G03P016F091R1_041.ab1    55 
  634    BE446087Td04P052G03P016F091F1_041.ab1   582 
  650  C BE446087Td04P052G03P016F091R1_041.ab1    35 
  670    BE446087Td04P052G03P016F091F1_041.ab1   618 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0