No. words: 574; after pruning: 548


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.6 -0.6 (1,1:247)  215  3.69 0.00 0.00  BE446403Ta14P078D02P108B031F1_036.ab1        4   247 (19)  C BE446403Ta14P078D02P108B031R1_036.ab1   (63)   245     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.6       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1  C BE446403Ta14P078D02P108B031R1_036.ab1   308 
   79    BE446403Ta14P078D02P108B031F1_036.ab1    19 
   83  C BE446403Ta14P078D02P108B031R1_036.ab1   226 
  119    BE446403Ta14P078D02P108B031F1_036.ab1    59 
  123  C BE446403Ta14P078D02P108B031R1_036.ab1   186 
  127    BE446403Ta14P078D02P108B031F1_036.ab1    67 
  131  C BE446403Ta14P078D02P108B031R1_036.ab1   178 
  297    BE446403Ta14P078D02P108B031F1_036.ab1   237 
Contig length: old 326, new 326

Contig length: old 326, new 326
New start: 0