No. words: 1137; after pruning: 1111


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.2 (1,1:424)  411  0.00 0.24 0.24  BE471274Ld09P067G01P067G071F1_032.ab1        1   425 (145)  C BE471274Ld09P067G01P067G071R1_032.ab1   (142)   425     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE471274Ld09P067G01P067G071R1_032.ab1   567 
  180    BE471274Ld09P067G01P067G071F1_032.ab1    37 
  192  C BE471274Ld09P067G01P067G071R1_032.ab1   376 
  208    BE471274Ld09P067G01P067G071F1_032.ab1    65 
  216  C BE471274Ld09P067G01P067G071R1_032.ab1   352 
  236    BE471274Ld09P067G01P067G071F1_032.ab1    93 
  240  C BE471274Ld09P067G01P067G071R1_032.ab1   328 
  268    BE471274Ld09P067G01P067G071F1_032.ab1   125 
  296  C BE471274Ld09P067G01P067G071R1_032.ab1   272 
  300    BE471274Ld09P067G01P067G071F1_032.ab1   157 
  308  C BE471274Ld09P067G01P067G071R1_032.ab1   260 
  332    BE471274Ld09P067G01P067G071F1_032.ab1   189 
  340  C BE471274Ld09P067G01P067G071R1_032.ab1   228 
  344    BE471274Ld09P067G01P067G071F1_032.ab1   201 
  352  C BE471274Ld09P067G01P067G071R1_032.ab1   216 
  364    BE471274Ld09P067G01P067G071F1_032.ab1   221 
  404  C BE471274Ld09P067G01P067G071R1_032.ab1   164 
  408    BE471274Ld09P067G01P067G071F1_032.ab1   265 
  416  C BE471274Ld09P067G01P067G071R1_032.ab1   152 
  420    BE471274Ld09P067G01P067G071F1_032.ab1   277 
  428  C BE471274Ld09P067G01P067G071R1_032.ab1   140 
  436    BE471274Ld09P067G01P067G071F1_032.ab1   293 
  460  C BE471274Ld09P067G01P067G071R1_032.ab1   108 
  464    BE471274Ld09P067G01P067G071F1_032.ab1   321 
  476  C BE471274Ld09P067G01P067G071R1_032.ab1    92 
  480    BE471274Ld09P067G01P067G071F1_032.ab1   337 
  500  C BE471274Ld09P067G01P067G071R1_032.ab1    68 
  508    BE471274Ld09P067G01P067G071F1_032.ab1   365 
  532  C BE471274Ld09P067G01P067G071R1_032.ab1    36 
  544    BE471274Ld09P067G01P067G071F1_032.ab1   401 
  548  C BE471274Ld09P067G01P067G071R1_032.ab1    20 
  552    BE471274Ld09P067G01P067G071F1_032.ab1   409 
Contig length: old 712, new 713

Contig length: old 713, new 713
New start: 0