No. words: 210; after pruning: 184


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    6   -2.5 -2.5 (1,1:58)   34  0.00 0.00 6.00  BE488378Sn27P053A04P053B041F1_052.ab1        4    53 (51)  C BE488378Sn27P053A04P053B041R1_052.ab1   (53)    53     7 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.5       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  2       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  16 nodes

 10 str. conn. components

Path
    1  C BE488378Sn27P053A04P053B041R1_052.ab1   106 
   75    BE488378Sn27P053A04P053B041F1_052.ab1    26 
Contig length: old 151, new 153

Contig length: old 153, new 154
New start: 0 
I Change at: 69; seg lengths: entry 1, contig 0