No. words: 1320; after pruning: 1294


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:486)  481  0.00 0.21 0.00  BE488609Ld04P103B04P103B101F2_066.ab1        1   487 (174)  C BE488609Ld04P103B04P103B101R2_066.ab1   (171)   488     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE488609Ld04P103B04P103B101R2_066.ab1   659 
  312    BE488609Ld04P103B04P103B101F2_066.ab1   140 
  364  C BE488609Ld04P103B04P103B101R2_066.ab1   296 
  376    BE488609Ld04P103B04P103B101F2_066.ab1   204 
  388  C BE488609Ld04P103B04P103B101R2_066.ab1   272 
  428    BE488609Ld04P103B04P103B101F2_066.ab1   256 
  600  C BE488609Ld04P103B04P103B101R2_066.ab1    60 
  604    BE488609Ld04P103B04P103B101F2_066.ab1   432 
  620  C BE488609Ld04P103B04P103B101R2_066.ab1    40 
  624    BE488609Ld04P103B04P103B101F2_066.ab1   452 
Contig length: old 833, new 833

Contig length: old 833, new 833
New start: 0