No. words: 1322; after pruning: 1296


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 6.3 (1,1:501)  491  0.00 0.20 0.20  BE488609Ld10P103B04P103B101F2_085.ab1        2   502 (148)  C BE488609Ld10P103B04P103B101R2_085.ab1   (171)   501     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BE488609Ld10P103B04P103B101R2_085.ab1   672 
  317    BE488609Ld10P103B04P103B101F2_085.ab1   146 
  329  C BE488609Ld10P103B04P103B101R2_085.ab1   344 
  361    BE488609Ld10P103B04P103B101F2_085.ab1   190 
Contig length: old 820, new 821

Contig length: old 821, new 821
New start: 0