No. words: 1137; after pruning: 1111


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.7 (1,1:501)  490  0.60 0.00 0.00  BE489244Ta23P016F04P038F101F1_092.ab1        1   502 (69)  C BE489244Ta23P016F04P038F101R1_092.ab1   (64)   502     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE489244Ta23P016F04P038F101R1_092.ab1   566 
  248    BE489244Ta23P016F04P038F101F1_092.ab1   184 
  252  C BE489244Ta23P016F04P038F101R1_092.ab1   315 
  280    BE489244Ta23P016F04P038F101F1_092.ab1   216 
  292  C BE489244Ta23P016F04P038F101R1_092.ab1   275 
  308    BE489244Ta23P016F04P038F101F1_092.ab1   244 
  312  C BE489244Ta23P016F04P038F101R1_092.ab1   255 
  456    BE489244Ta23P016F04P038F101F1_092.ab1   392 
  460  C BE489244Ta23P016F04P038F101R1_092.ab1   107 
  468    BE489244Ta23P016F04P038F101F1_092.ab1   404 
  496  C BE489244Ta23P016F04P038F101R1_092.ab1    71 
  508    BE489244Ta23P016F04P038F101F1_092.ab1   444 
Contig length: old 635, new 635

Contig length: old 635, new 635
New start: 0