No. words: 1263; after pruning: 1237


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:581)  574  0.00 0.00 0.00  BE489326Td07P088G12P034G031F1_041.ab1        1   582 (54)  C BE489326Td07P088G12P034G031R1_041.ab1   (45)   582     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BE489326Td07P088G12P034G031R1_041.ab1   627 
   85    BE489326Td07P088G12P034G031F1_041.ab1    40 
  109  C BE489326Td07P088G12P034G031R1_041.ab1   519 
  385    BE489326Td07P088G12P034G031F1_041.ab1   340 
  417  C BE489326Td07P088G12P034G031R1_041.ab1   211 
  429    BE489326Td07P088G12P034G031F1_041.ab1   384 
  453  C BE489326Td07P088G12P034G031R1_041.ab1   175 
  457    BE489326Td07P088G12P034G031F1_041.ab1   412 
  465  C BE489326Td07P088G12P034G031R1_041.ab1   163 
  517    BE489326Td07P088G12P034G031F1_041.ab1   472 
  529  C BE489326Td07P088G12P034G031R1_041.ab1    99 
  545    BE489326Td07P088G12P034G031F1_041.ab1   500 
Contig length: old 681, new 681

Contig length: old 681, new 681
New start: 0