No. words: 1067; after pruning: 1041


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 2.6 (1,1:483)  428  2.29 0.21 0.21  BE490613Td09P129F04P146C081F1_007.ab1        4   484 (53)  C BE490613Td09P129F04P146C081R1_007.ab1   (49)   481     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C BE490613Td09P129F04P146C081R1_007.ab1   530 
   62    BE490613Td09P129F04P146C081F1_007.ab1    15 
Contig length: old 583, new 584

Contig length: old 584, new 584
New start: 0 
S Change at: 85; seg lengths: entry 3, contig 3