No. words: 1712; after pruning: 1672


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:1235)  466  0.21 0.00 0.00  BE490651Ta12P003C06P052D051F1_074.ab1      349   824 (0)  C BE490651Ta12P003C06P052D051R1_074.ab1   (0)   888   413 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    BE490651Ta12P003C06P052D051F1_074.ab1     1 
  549  C BE490651Ta12P003C06P052D051R1_074.ab1   688 
  553    BE490651Ta12P003C06P052D051F1_074.ab1   553 
  561  C BE490651Ta12P003C06P052D051R1_074.ab1   676 
  581    BE490651Ta12P003C06P052D051F1_074.ab1   581 
  585  C BE490651Ta12P003C06P052D051R1_074.ab1   652 
Contig length: old 1236, new 1236

Contig length: old 1236, new 1236
New start: 0