No. words: 1013; after pruning: 987


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:491)  457  0.81 0.00 0.00  BE490744At02P067F02P067F081F1_066.ab1        1   492 (13)  C BE490744At02P067F02P067F081R1_066.ab1   (16)   492     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE490744At02P067F02P067F081R1_066.ab1   508 
   20    BE490744At02P067F02P067F081F1_066.ab1     4 
   40  C BE490744At02P067F02P067F081R1_066.ab1   469 
   56    BE490744At02P067F02P067F081F1_066.ab1    40 
  132  C BE490744At02P067F02P067F081R1_066.ab1   377 
  136    BE490744At02P067F02P067F081F1_066.ab1   120 
  144  C BE490744At02P067F02P067F081R1_066.ab1   365 
  156    BE490744At02P067F02P067F081F1_066.ab1   140 
  192  C BE490744At02P067F02P067F081R1_066.ab1   317 
  256    BE490744At02P067F02P067F081F1_066.ab1   240 
  360  C BE490744At02P067F02P067F081R1_066.ab1   149 
  364    BE490744At02P067F02P067F081F1_066.ab1   348 
  388  C BE490744At02P067F02P067F081R1_066.ab1   121 
  392    BE490744At02P067F02P067F081F1_066.ab1   376 
  400  C BE490744At02P067F02P067F081R1_066.ab1   109 
  408    BE490744At02P067F02P067F081F1_066.ab1   392 
  424  C BE490744At02P067F02P067F081R1_066.ab1    85 
  428    BE490744At02P067F02P067F081F1_066.ab1   412 
  440  C BE490744At02P067F02P067F081R1_066.ab1    69 
  444    BE490744At02P067F02P067F081F1_066.ab1   428 
  472  C BE490744At02P067F02P067F081R1_066.ab1    37 
  488    BE490744At02P067F02P067F081F1_066.ab1   472 
  492  C BE490744At02P067F02P067F081R1_066.ab1    17 
  500    BE490744At02P067F02P067F081F1_066.ab1   484 
Contig length: old 521, new 521

Contig length: old 521, new 521
New start: 0