No. words: 1007; after pruning: 981


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.0 (1,1:322)  320  0.31 0.00 0.00  BE490765Ld06P016D05P016D111F1_066.ab1        1   323 (187)  C BE490765Ld06P016D05P016D111R1_066.ab1   (174)   323     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1  C BE490765Ld06P016D05P016D111R1_066.ab1   497 
  352    BE490765Ld06P016D05P016D111F1_066.ab1   178 
  356  C BE490765Ld06P016D05P016D111R1_066.ab1   142 
  404    BE490765Ld06P016D05P016D111F1_066.ab1   230 
  428  C BE490765Ld06P016D05P016D111R1_066.ab1    70 
  456    BE490765Ld06P016D05P016D111F1_066.ab1   282 
  460  C BE490765Ld06P016D05P016D111R1_066.ab1    38 
  464    BE490765Ld06P016D05P016D111F1_066.ab1   290 
  468  C BE490765Ld06P016D05P016D111R1_066.ab1    30 
  476    BE490765Ld06P016D05P016D111F1_066.ab1   302 
Contig length: old 684, new 684

Contig length: old 684, new 684
New start: 0