No. words: 1747; after pruning: 1721


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.5 (1,1:983)  748  0.00 0.00 0.00  BE494474Ld10P078F02P078F081F1_093.ab1       97   858 (1)  C BE494474Ld10P078F02P078F081R1_093.ab1   (0)   888   127 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1    BE494474Ld10P078F02P078F081F1_093.ab1     1 
  124  C BE494474Ld10P078F02P078F081R1_093.ab1   861 
  128    BE494474Ld10P078F02P078F081F1_093.ab1   128 
  180  C BE494474Ld10P078F02P078F081R1_093.ab1   805 
  184    BE494474Ld10P078F02P078F081F1_093.ab1   184 
  224  C BE494474Ld10P078F02P078F081R1_093.ab1   761 
  228    BE494474Ld10P078F02P078F081F1_093.ab1   228 
  264  C BE494474Ld10P078F02P078F081R1_093.ab1   721 
  268    BE494474Ld10P078F02P078F081F1_093.ab1   268 
  284  C BE494474Ld10P078F02P078F081R1_093.ab1   701 
  288    BE494474Ld10P078F02P078F081F1_093.ab1   288 
  292  C BE494474Ld10P078F02P078F081R1_093.ab1   693 
  300    BE494474Ld10P078F02P078F081F1_093.ab1   300 
  304  C BE494474Ld10P078F02P078F081R1_093.ab1   681 
Contig length: old 984, new 984

Contig length: old 984, new 984
New start: 0