No. words: 1721; after pruning: 1695


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:885)  760  0.13 0.00 0.00  BE494474Sn32P116B04P078F081F1_080.ab1        1   778 (0)  C BE494474Sn32P116B04P078F081R1_080.ab1   (57)   886   109 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  386 nodes

 195 str. conn. components

Path
    1  C BE494474Sn32P116B04P078F081R1_080.ab1   943 
   61    BE494474Sn32P116B04P078F081F1_080.ab1     4 
   73  C BE494474Sn32P116B04P078F081R1_080.ab1   871 
   84    BE494474Sn32P116B04P078F081F1_080.ab1    27 
  276  C BE494474Sn32P116B04P078F081R1_080.ab1   668 
  280    BE494474Sn32P116B04P078F081F1_080.ab1   223 
  296  C BE494474Sn32P116B04P078F081R1_080.ab1   648 
  324    BE494474Sn32P116B04P078F081F1_080.ab1   267 
  336  C BE494474Sn32P116B04P078F081R1_080.ab1   608 
  384    BE494474Sn32P116B04P078F081F1_080.ab1   327 
  388  C BE494474Sn32P116B04P078F081R1_080.ab1   556 
  472    BE494474Sn32P116B04P078F081F1_080.ab1   415 
  484  C BE494474Sn32P116B04P078F081R1_080.ab1   460 
Contig length: old 943, new 943

Contig length: old 943, new 943
New start: 0