No. words: 1729; after pruning: 1689


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.7 (1,1:873)  835  0.24 0.00 0.00  BE494807Sn32P137B04P078G081F1_050.ab1       26   874 (6)  C BE494807Sn32P137B04P078G081R1_050.ab1   (0)   849     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  422 nodes

 213 str. conn. components

Path
    1    BE494807Sn32P137B04P078G081F1_050.ab1     1 
  395  C BE494807Sn32P137B04P078G081R1_050.ab1   480 
  431    BE494807Sn32P137B04P078G081F1_050.ab1   431 
  451  C BE494807Sn32P137B04P078G081R1_050.ab1   424 
  475    BE494807Sn32P137B04P078G081F1_050.ab1   475 
  479  C BE494807Sn32P137B04P078G081R1_050.ab1   396 
  871    BE494807Sn32P137B04P078G081F1_050.ab1   871 
Contig length: old 880, new 880

Contig length: old 880, new 880
New start: 0