No. words: 1737; after pruning: 1683


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.0 (1,1:863)  849  0.35 0.00 0.00  BE494807Ta17P137B04P078G081F1_063.ab1        1   864 (4)  C BE494807Ta17P137B04P078G081R1_063.ab1   (5)   864     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  428 nodes

 216 str. conn. components

Path
    1  C BE494807Ta17P137B04P078G081R1_063.ab1   869 
    9    BE494807Ta17P137B04P078G081F1_063.ab1     4 
  289  C BE494807Ta17P137B04P078G081R1_063.ab1   581 
  293    BE494807Ta17P137B04P078G081F1_063.ab1   288 
  321  C BE494807Ta17P137B04P078G081R1_063.ab1   549 
  325    BE494807Ta17P137B04P078G081F1_063.ab1   320 
  374  C BE494807Ta17P137B04P078G081R1_063.ab1   496 
  382    BE494807Ta17P137B04P078G081F1_063.ab1   377 
  390  C BE494807Ta17P137B04P078G081R1_063.ab1   480 
  426    BE494807Ta17P137B04P078G081F1_063.ab1   421 
  434  C BE494807Ta17P137B04P078G081R1_063.ab1   436 
  502    BE494807Ta17P137B04P078G081F1_063.ab1   497 
  510  C BE494807Ta17P137B04P078G081R1_063.ab1   360 
  866    BE494807Ta17P137B04P078G081F1_063.ab1   861 
Contig length: old 873, new 873

Contig length: old 873, new 873
New start: 0