No. words: 1694; after pruning: 1654


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:873)  808  0.12 0.00 0.00  BE494807Td05P137B04P078G081F1_043.ab1       14   833 (0)  C BE494807Td05P137B04P078G081R1_043.ab1   (0)   861    42 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  410 nodes

 207 str. conn. components

Path
    1    BE494807Td05P137B04P078G081F1_043.ab1     1 
  294  C BE494807Td05P137B04P078G081R1_043.ab1   581 
  298    BE494807Td05P137B04P078G081F1_043.ab1   298 
  358  C BE494807Td05P137B04P078G081R1_043.ab1   517 
  366    BE494807Td05P137B04P078G081F1_043.ab1   366 
  374  C BE494807Td05P137B04P078G081R1_043.ab1   501 
  386    BE494807Td05P137B04P078G081F1_043.ab1   386 
  398  C BE494807Td05P137B04P078G081R1_043.ab1   477 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0