No. words: 1778; after pruning: 1752


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 12.1 (1,1:752)  702  0.13 0.13 0.27  BE498786Ld10P103F05P103F111F1_084.ab1        9   754 (126)  C BE498786Ld10P103F05P103F111R1_084.ab1   (153)   745     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C BE498786Ld10P103F05P103F111R1_084.ab1   898 
  171    BE498786Ld10P103F05P103F111F1_084.ab1    25 
  187  C BE498786Ld10P103F05P103F111R1_084.ab1   712 
  198    BE498786Ld10P103F05P103F111F1_084.ab1    52 
  222  C BE498786Ld10P103F05P103F111R1_084.ab1   677 
  238    BE498786Ld10P103F05P103F111F1_084.ab1    92 
  258  C BE498786Ld10P103F05P103F111R1_084.ab1   641 
  266    BE498786Ld10P103F05P103F111F1_084.ab1   120 
  286  C BE498786Ld10P103F05P103F111R1_084.ab1   613 
  746    BE498786Ld10P103F05P103F111F1_084.ab1   600 
  758  C BE498786Ld10P103F05P103F111R1_084.ab1   141 
  786    BE498786Ld10P103F05P103F111F1_084.ab1   640 
  798  C BE498786Ld10P103F05P103F111R1_084.ab1   101 
  810    BE498786Ld10P103F05P103F111F1_084.ab1   664 
  814  C BE498786Ld10P103F05P103F111R1_084.ab1    85 
  846    BE498786Ld10P103F05P103F111F1_084.ab1   700 
  850  C BE498786Ld10P103F05P103F111R1_084.ab1    49 
  878    BE498786Ld10P103F05P103F111F1_084.ab1   732 
Contig length: old 1025, new 1026

Contig length: old 1026, new 1026
New start: 0