No. words: 1179; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:538)  517  0.00 0.00 0.55  BE499309As02P026F08P026B111F1_091.ab1        1   541 (39)  C BE499309As02P026F08P026B111R1_091.ab1   (61)   538     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C BE499309As02P026F08P026B111R1_091.ab1   599 
  181    BE499309As02P026F08P026B111F1_091.ab1   120 
  185  C BE499309As02P026F08P026B111R1_091.ab1   415 
  245    BE499309As02P026F08P026B111F1_091.ab1   184 
  305  C BE499309As02P026F08P026B111R1_091.ab1   295 
  313    BE499309As02P026F08P026B111F1_091.ab1   252 
  333  C BE499309As02P026F08P026B111R1_091.ab1   267 
  425    BE499309As02P026F08P026B111F1_091.ab1   364 
  461  C BE499309As02P026F08P026B111R1_091.ab1   139 
  477    BE499309As02P026F08P026B111F1_091.ab1   416 
  513  C BE499309As02P026F08P026B111R1_091.ab1    87 
  517    BE499309As02P026F08P026B111F1_091.ab1   456 
Contig length: old 640, new 641

Contig length: old 641, new 641
New start: 0