No. words: 1290; after pruning: 1264


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:528)  520  0.00 0.00 0.00  BE499309Ld06P026F08P026B111F1_011.ab1        1   529 (133)  C BE499309Ld06P026F08P026B111R1_011.ab1   (99)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C BE499309Ld06P026F08P026B111R1_011.ab1   628 
  135    BE499309Ld06P026F08P026B111F1_011.ab1    36 
  143  C BE499309Ld06P026F08P026B111R1_011.ab1   486 
  355    BE499309Ld06P026F08P026B111F1_011.ab1   256 
  559  C BE499309Ld06P026F08P026B111R1_011.ab1    70 
  571    BE499309Ld06P026F08P026B111F1_011.ab1   472 
Contig length: old 761, new 761

Contig length: old 761, new 761
New start: 0