No. words: 1065; after pruning: 1039


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:479)  472  0.00 0.00 0.00  BE500759Ta16P095D08P078C091F1_066.ab1        1   480 (56)  C BE500759Ta16P095D08P078C091R1_066.ab1   (49)   480     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C BE500759Ta16P095D08P078C091R1_066.ab1   529 
  165    BE500759Ta16P095D08P078C091F1_066.ab1   116 
  185  C BE500759Ta16P095D08P078C091R1_066.ab1   345 
  189    BE500759Ta16P095D08P078C091F1_066.ab1   140 
  205  C BE500759Ta16P095D08P078C091R1_066.ab1   325 
  225    BE500759Ta16P095D08P078C091F1_066.ab1   176 
  237  C BE500759Ta16P095D08P078C091R1_066.ab1   293 
  273    BE500759Ta16P095D08P078C091F1_066.ab1   224 
  293  C BE500759Ta16P095D08P078C091R1_066.ab1   237 
  333    BE500759Ta16P095D08P078C091F1_066.ab1   284 
  341  C BE500759Ta16P095D08P078C091R1_066.ab1   189 
  397    BE500759Ta16P095D08P078C091F1_066.ab1   348 
  441  C BE500759Ta16P095D08P078C091R1_066.ab1    89 
  445    BE500759Ta16P095D08P078C091F1_066.ab1   396 
  477  C BE500759Ta16P095D08P078C091R1_066.ab1    53 
  481    BE500759Ta16P095D08P078C091F1_066.ab1   432 
  501  C BE500759Ta16P095D08P078C091R1_066.ab1    29 
  505    BE500759Ta16P095D08P078C091F1_066.ab1   456 
Contig length: old 585, new 585

Contig length: old 585, new 585
New start: 0