No. words: 1218; after pruning: 1192


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:560)  545  0.00 0.00 0.00  BE517709Sn29P101C07P067E101F1_019.ab1        1   561 (49)  C BE517709Sn29P101C07P067E101R1_019.ab1   (47)   561     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE517709Sn29P101C07P067E101R1_019.ab1   608 
  175    BE517709Sn29P101C07P067E101F1_019.ab1   128 
  179  C BE517709Sn29P101C07P067E101R1_019.ab1   430 
  487    BE517709Sn29P101C07P067E101F1_019.ab1   440 
  499  C BE517709Sn29P101C07P067E101R1_019.ab1   110 
  515    BE517709Sn29P101C07P067E101F1_019.ab1   468 
  543  C BE517709Sn29P101C07P067E101R1_019.ab1    66 
  551    BE517709Sn29P101C07P067E101F1_019.ab1   504 
Contig length: old 657, new 657

Contig length: old 657, new 657
New start: 0