No. words: 1337; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:573)  552  0.70 0.00 0.00  BE517709Ta13P067E04P101F071F1_003.ab1        1   574 (111)  C BE517709Ta13P067E04P101F071R1_003.ab1   (78)   574     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BE517709Ta13P067E04P101F071R1_003.ab1   652 
  150    BE517709Ta13P067E04P101F071F1_003.ab1    72 
  190  C BE517709Ta13P067E04P101F071R1_003.ab1   463 
  222    BE517709Ta13P067E04P101F071F1_003.ab1   144 
  294  C BE517709Ta13P067E04P101F071R1_003.ab1   359 
  302    BE517709Ta13P067E04P101F071F1_003.ab1   224 
  334  C BE517709Ta13P067E04P101F071R1_003.ab1   319 
  350    BE517709Ta13P067E04P101F071F1_003.ab1   272 
  358  C BE517709Ta13P067E04P101F071R1_003.ab1   295 
  366    BE517709Ta13P067E04P101F071F1_003.ab1   288 
  386  C BE517709Ta13P067E04P101F071R1_003.ab1   267 
  398    BE517709Ta13P067E04P101F071F1_003.ab1   320 
  510  C BE517709Ta13P067E04P101F071R1_003.ab1   143 
  522    BE517709Ta13P067E04P101F071F1_003.ab1   444 
  530  C BE517709Ta13P067E04P101F071R1_003.ab1   123 
  534    BE517709Ta13P067E04P101F071F1_003.ab1   456 
Contig length: old 763, new 763

Contig length: old 763, new 763
New start: 0