No. words: 1341; after pruning: 1315


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.0 (1,1:599)  555  1.50 0.00 0.17  BE517709Ta14P067E04P101F071F1_004.ab1        2   600 (49)  C BE517709Ta14P067E04P101F071R1_004.ab1   (94)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BE517709Ta14P067E04P101F071R1_004.ab1   692 
  129    BE517709Ta14P067E04P101F071F1_004.ab1    36 
  133  C BE517709Ta14P067E04P101F071R1_004.ab1   560 
  341    BE517709Ta14P067E04P101F071F1_004.ab1   248 
  349  C BE517709Ta14P067E04P101F071R1_004.ab1   344 
  357    BE517709Ta14P067E04P101F071F1_004.ab1   264 
  361  C BE517709Ta14P067E04P101F071R1_004.ab1   332 
  365    BE517709Ta14P067E04P101F071F1_004.ab1   272 
  389  C BE517709Ta14P067E04P101F071R1_004.ab1   304 
  405    BE517709Ta14P067E04P101F071F1_004.ab1   312 
Contig length: old 741, new 742

Contig length: old 742, new 742
New start: 0