No. words: 1210; after pruning: 1184


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:547)  527  0.00 0.00 0.18  BE517709Ta23P101C07P067E101F1_025.ab1        1   548 (60)  C BE517709Ta23P101C07P067E101R1_025.ab1   (55)   547     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C BE517709Ta23P101C07P067E101R1_025.ab1   602 
   79    BE517709Ta23P101C07P067E101F1_025.ab1    24 
   83  C BE517709Ta23P101C07P067E101R1_025.ab1   520 
   91    BE517709Ta23P101C07P067E101F1_025.ab1    36 
  103  C BE517709Ta23P101C07P067E101R1_025.ab1   500 
  139    BE517709Ta23P101C07P067E101F1_025.ab1    84 
  147  C BE517709Ta23P101C07P067E101R1_025.ab1   456 
  159    BE517709Ta23P101C07P067E101F1_025.ab1   104 
  163  C BE517709Ta23P101C07P067E101R1_025.ab1   440 
  171    BE517709Ta23P101C07P067E101F1_025.ab1   116 
  183  C BE517709Ta23P101C07P067E101R1_025.ab1   420 
  191    BE517709Ta23P101C07P067E101F1_025.ab1   136 
  195  C BE517709Ta23P101C07P067E101R1_025.ab1   408 
  199    BE517709Ta23P101C07P067E101F1_025.ab1   144 
  207  C BE517709Ta23P101C07P067E101R1_025.ab1   396 
  215    BE517709Ta23P101C07P067E101F1_025.ab1   160 
  243  C BE517709Ta23P101C07P067E101R1_025.ab1   360 
  247    BE517709Ta23P101C07P067E101F1_025.ab1   192 
  287  C BE517709Ta23P101C07P067E101R1_025.ab1   316 
  291    BE517709Ta23P101C07P067E101F1_025.ab1   236 
  315  C BE517709Ta23P101C07P067E101R1_025.ab1   288 
  339    BE517709Ta23P101C07P067E101F1_025.ab1   284 
  347  C BE517709Ta23P101C07P067E101R1_025.ab1   256 
  355    BE517709Ta23P101C07P067E101F1_025.ab1   300 
Contig length: old 662, new 663

Contig length: old 663, new 663
New start: 0