No. words: 1238; after pruning: 1212


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 12.1 (1,1:579)  557  0.00 0.00 0.00  BE517709Td02P101C07P067E101F1_016.ab1        8   580 (45)  C BE517709Td02P101C07P067E101R1_016.ab1   (40)   573     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C BE517709Td02P101C07P067E101R1_016.ab1   613 
  172    BE517709Td02P101C07P067E101F1_016.ab1   139 
  180  C BE517709Td02P101C07P067E101R1_016.ab1   434 
  444    BE517709Td02P101C07P067E101F1_016.ab1   411 
  448  C BE517709Td02P101C07P067E101R1_016.ab1   166 
  468    BE517709Td02P101C07P067E101F1_016.ab1   435 
  476  C BE517709Td02P101C07P067E101R1_016.ab1   138 
  488    BE517709Td02P101C07P067E101F1_016.ab1   455 
  492  C BE517709Td02P101C07P067E101R1_016.ab1   122 
  504    BE517709Td02P101C07P067E101F1_016.ab1   471 
  512  C BE517709Td02P101C07P067E101R1_016.ab1   102 
  516    BE517709Td02P101C07P067E101F1_016.ab1   483 
  520  C BE517709Td02P101C07P067E101R1_016.ab1    94 
  524    BE517709Td02P101C07P067E101F1_016.ab1   491 
  540  C BE517709Td02P101C07P067E101R1_016.ab1    74 
  548    BE517709Td02P101C07P067E101F1_016.ab1   515 
  552  C BE517709Td02P101C07P067E101R1_016.ab1    62 
  556    BE517709Td02P101C07P067E101F1_016.ab1   523 
  596  C BE517709Td02P101C07P067E101R1_016.ab1    18 
  600    BE517709Td02P101C07P067E101F1_016.ab1   567 
Contig length: old 658, new 658

Contig length: old 658, new 658
New start: 0