No. words: 1240; after pruning: 1214


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 11.2 (1,1:581)  554  0.17 0.00 0.00  BE517709Td04P101C07P067E101F1_014.ab1       11   582 (46)  C BE517709Td04P101C07P067E101R1_014.ab1   (40)   572     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C BE517709Td04P101C07P067E101R1_014.ab1   612 
  174    BE517709Td04P101C07P067E101F1_014.ab1   144 
  178  C BE517709Td04P101C07P067E101R1_014.ab1   435 
  470    BE517709Td04P101C07P067E101F1_014.ab1   440 
  478  C BE517709Td04P101C07P067E101R1_014.ab1   135 
  506    BE517709Td04P101C07P067E101F1_014.ab1   476 
  510  C BE517709Td04P101C07P067E101R1_014.ab1   103 
  514    BE517709Td04P101C07P067E101F1_014.ab1   484 
  522  C BE517709Td04P101C07P067E101R1_014.ab1    91 
  526    BE517709Td04P101C07P067E101F1_014.ab1   496 
  542  C BE517709Td04P101C07P067E101R1_014.ab1    71 
  546    BE517709Td04P101C07P067E101F1_014.ab1   516 
Contig length: old 658, new 658

Contig length: old 658, new 658
New start: 0